A new millennia ushered in novel experimental capabilities to investigate engineered quantum systems. Gases consisting of charge neutral atoms are cooled to the ground state and by exploiting the dipole interaction can be trapped by laser light. In ultracold atomic systems the tunneling and interactions are controllable, and the system is absent of disorder. Disorder and interactions in solid-state systems inhibits a complete understanding of transport phenomena. Theoretical investigations into non-equilibrium and equilibrium dynamics of fermions in discretized potentials and in continuum are presented. The affect of controllable, external system parameters is evaluated and exploited to reveal new properties of fermion dynamics. My thesis will begin with an overview of the physics associated with many-body fermion and the models used to obtain results, followed by my thesis research on how matter-waves can be manipulated by lattice geometry and tunneling strengths. Next, I present how dissipation affects current in a continuous ring, demonstrating rate-dependent hysteresis as the particles are driven by an artificial gauge field. After presenting the continuous ring, I will then focus on persistent current and corresponding quantum current fluctuations in a discretized ring. Lissajous curves are found in the system whose area strongly depends on the presence and absence of interactions. Lastly, I will discuss dynamical detection methods for one-dimensional topological insulators using ultracold fermions. All of the results are supported with discussion on how they can be realized using current experimental technology.
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